NeuroImage
-
The goal of this review is to describe, from a personal perspective, the development and emergence of the resting state fMRI. In particular, various concepts derived from the resting state data are discussed in detail, including connectivity, amplitude of the fluctuations, analysis techniques, and use in clinical populations. We also briefly summarize our efforts in creating an open data sharing platform as well as both a journal and a conference dedicated to brain connectivity. All three projects are aimed at significantly increasing the impact of resting state fMRI developments and enabling large, collaborative science projects.
-
This article provides a personal perspective of the adoption of path analysis (structural equation modeling) to neuroimaging. The paper covers the motivation stemming from the need to merge functional measures with neuroanatomy and early innovations in its application. The use of path analysis as a means to test directional hypotheses about networks is presented along with the development of the complementary method, partial least squares. A method is useful when it provides insights that were previously inaccessible, and reflecting this, the paper concludes with a synopsis of the theoretical developments that arose for the routine use of methods like path analysis.
-
T2*-weighted Blood Oxygen Level Dependent (BOLD) functional magnetic resonance imaging (fMRI) requires efficient acquisition methods in order to fully sample the brain in a several second time period. The most widely used approach is Echo Planar Imaging (EPI), which utilizes a Cartesian trajectory to cover k-space. This trajectory is subject to ghosts from off-resonance and gradient imperfections and is intrinsically sensitive to cardiac-induced pulsatile motion from substantial first- and higher order moments of the gradient waveform near the k-space origin. ⋯ Spiral methods have reduced sensitivity to motion, shorter readout times, improved signal recovery in most frontal and parietal brain regions, and exhibit blurring artifacts instead of ghosts or geometric distortion. Methods combining spiral-in and spiral-out trajectories have further advantages in terms of diminished susceptibility-induced signal dropout and increased BOLD signal. In measurements of temporal signal to noise ratio measured in 8 subjects, spiral-in/out exhibited significant increases over EPI in voxel volumes recovered in frontal and whole brain regions (18% and 10%, respectively).
-
A major challenge for fMRI at high spatial resolution is the limited temporal resolution. The UNFOLD method increases image acquisition speed and potentially enables high acceleration factors in fMRI. Spatial aliasing artifacts due to interleaved k-space sampling are to be removed from the image time series by temporal filtering before statistical mapping in the time domain can be carried out. ⋯ When the proposed filtering strategy was used, a linear regression analysis revealed that the number of false positives was significantly decreased up to 34% whereas the number of activated voxels was not significantly affected for most filter parameters. In total, this led to an effective increase in the number of activated voxels per false positive for each filter set-up. At a significance level of 5%, the number of activated voxels was increased up to 41% by using the proposed filtering strategy.
-
The regions at risk of ischemia following cardio-respiratory arrest have not been systematically analysed. This knowledge may be of use in determining the mechanism of ischemic injury at vulnerable sites. The aim of this study is to evaluate the use of principal component analysis to analyse the covariance patterns of hypoxic ischemic injury. ⋯ The sensitivity analysis showed that the pattern of ischemic injury did not change when the analysis was restricted to patients who died. In conclusion, PCA method has many advantages over probabilistic method. In the context of this dataset, PCA showed covariance between deep grey matter nuclei and the posterior cortical structures whereas the probabilistic map provided complementary information on the frequency of occurrence at these locations.