• Bioinformatics · Apr 2011

    Gobe: an interactive, web-based tool for comparative genomic visualization.

    • Brent S Pedersen, Haibao Tang, and Michael Freeling.
    • Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA. bpederse@berkeley.edu
    • Bioinformatics. 2011 Apr 1; 27 (7): 1015-6.

    UnlabelledGobe is a web-based tool for viewing comparative genomic data. It supports viewing multiple genomic regions simultaneously. Its simple text format and flash-based rendering make it an interactive, exploratory research tool. Gobe can be used without installation through our web service, or downloaded and customized with stylesheets and javascript callback functions.AvailabilityGobe is a flash application that runs in all modern web-browsers. The full source-code, including that for the online web application is available under the MIT license at: http://github.com/brentp/gobe. Sample applications are hosted at http://try-gobe.appspot.com/ and http://synteny.cnr.berkeley.edu/gobe-app/.

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