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- K Mizuguchi, C M Deane, T L Blundell, M S Johnson, and J P Overington.
- Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1GA, UK. kenji@cryst.bioc.cam.ac.uk
- Bioinformatics. 1998 Jan 1; 14 (7): 617-23.
MotivationJOY is a program to annotate protein sequence alignments with three-dimensional (3D) structural features. It was developed to display 3D structural information in a sequence alignment and to help understand the conservation of amino acids in their specific local environments.Results: The JOY representation now constitutes an essential part of the two databases of protein structure alignments: HOMSTRAD (http://www-cryst.bioc.cam.ac.uk/homstrad ) and CAMPASS (http://www-cryst.bioc.cam.ac. uk/campass). It has also been successfully used for identifying distant evolutionary relationships.AvailabilityThe program can be obtained via anonymous ftp from torsa.bioc.cam.ac.uk from the directory /pub/joy/. The address for the JOY server is http://www-cryst.bioc.cam.ac.uk/cgi-bin/joy.cgi.Contactkenji@cryst.bioc.cam.ac.uk
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