• J Neuroimaging · Apr 2013

    Accelerating EPI distortion correction by utilizing a modern GPU-based parallel computation.

    • Yao-Hao Yang, Teng-Yi Huang, Fu-Nien Wang, Tzu-Chao Chuang, and Nan-Kuei Chen.
    • Department of Electrical Engineering, National Taiwan University of Science and Technology, Taipei, Taiwan, ROC.
    • J Neuroimaging. 2013 Apr 1;23(2):202-6.

    Background And PurposeThe combination of phase demodulation and field mapping is a practical method to correct echo planar imaging (EPI) geometric distortion. However, since phase dispersion accumulates in each phase-encoding step, the calculation complexity of phase modulation is Ny-fold higher than conventional image reconstructions. Thus, correcting EPI images via phase demodulation is generally a time-consuming task.MethodsParallel computing by employing general-purpose calculations on graphics processing units (GPU) can accelerate scientific computing if the algorithm is parallelized. This study proposes a method that incorporates the GPU-based technique into phase demodulation calculations to reduce computation time. The proposed parallel algorithm was applied to a PROPELLER-EPI diffusion tensor data set.ResultsThe GPU-based phase demodulation method reduced the EPI distortion correctly, and accelerated the computation. The total reconstruction time of the 16-slice PROPELLER-EPI diffusion tensor images with matrix size of 128 × 128 was reduced from 1,754 seconds to 101 seconds by utilizing the parallelized 4-GPU program.ConclusionsGPU computing is a promising method to accelerate EPI geometric correction. The resulting reduction in computation time of phase demodulation should accelerate postprocessing for studies performed with EPI, and should effectuate the PROPELLER-EPI technique for clinical practice.Copyright © 2011 by the American Society of Neuroimaging.

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